fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
Classes | Namespaces | Concepts | Typedefs
index.hpp File Reference
#include <sharg/exceptions.hpp>
#include <raptor/argument_parsing/build_arguments.hpp>
#include <raptor/hierarchical_interleaved_bloom_filter.hpp>
#include <raptor/strong_types.hpp>

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Classes

class  raptor::raptor_index< data_t >
 

Namespaces

namespace  raptor
 
namespace  raptor::index_structure
 

Concepts

concept  raptor::index_structure::compressible_from
 

Typedefs

using raptor::index_structure::ibf = seqan3::interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using raptor::index_structure::ibf_compressed = seqan3::interleaved_bloom_filter< seqan3::data_layout::compressed >
 
using raptor::index_structure::hibf = hierarchical_interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using raptor::index_structure::hibf_compressed = hierarchical_interleaved_bloom_filter< seqan3::data_layout::compressed >