fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
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#include <seqan3/io/views/async_input_buffer.hpp>
#include <raptor/argument_parsing/init_shared_meta.hpp>
#include <raptor/argument_parsing/search_parsing.hpp>
#include <raptor/argument_parsing/validators.hpp>
#include <raptor/dna4_traits.hpp>
#include <raptor/index.hpp>
#include <raptor/search/search.hpp>
Namespaces | |
namespace | raptor |
Functions | |
std::ostream & | raptor::operator<< (std::ostream &s, pattern_size const &) |
std::istream & | raptor::operator>> (std::istream &s, pattern_size &pattern_size_) |
void | raptor::init_search_parser (sharg::parser &parser, search_arguments &arguments) |
void | raptor::search_parsing (sharg::parser &parser, bool const is_socks) |