fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
dna4_traits.hpp
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1// --------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/raptor/blob/main/LICENSE.md
6// --------------------------------------------------------------------------------------------------
7
8#pragma once
9
10#include <seqan3/io/sequence_file/input.hpp>
11
12namespace raptor
13{
14
15struct dna4_traits : seqan3::sequence_file_input_default_traits_dna
16{
17 using sequence_alphabet = seqan3::dna4;
18};
19
20} // namespace raptor
Definition: adjust_seed.hpp:13
Definition: dna4_traits.hpp:16
seqan3::dna4 sequence_alphabet
Definition: dna4_traits.hpp:17